avatarMatt Williams-Spooner, Ph.D.

Summary

The website content discusses the dynamics of cooperation and competition among bacteria, emphasizing the role of lateral gene transfer in bacterial evolution and efficiency.

Abstract

The article "CCBE — Part 2: Bacteria and lateral gene transfer" delves into the complex interactions among microorganisms, particularly bacteria. It challenges the common perception of bacteria as merely pathogenic, highlighting the symbiotic relationship between humans and beneficial bacteria, which outnumber human cells. The text explores how bacteria compete for resources and replicate, with faster replication offering a competitive edge. It introduces lateral gene transfer as a form of genetic cooperation, allowing bacteria to exchange genes for improved energetic efficiency and replication rates. The concept of ATP as the universal energy currency is explained, underscoring its critical role in biological processes, including bacterial replication. The article concludes by setting the stage for a continuation of the discussion on the implications of cooperation and competition in bacterial evolution.

Opinions

  • The article suggests a reevaluation of bacteria, moving away from the narrow view of them as solely harmful, and instead recognizing the diverse roles they play in ecosystems, including within the human body.
  • It posits that the bacterial processes of competition and cooperation are fundamental to understanding life's processes at a molecular level.
  • The text conveys that lateral gene transfer is a key mechanism in bacterial evolution, allowing for rapid adaptation and diversification.
  • The author implies that the bacterial strategy of purging non-essential genes for energy optimization is a sophisticated survival technique, reflecting a complex level of biological organization and adaptation.
  • The article hints at a broader narrative that connects bacterial behavior to larger themes in evolutionary biology, to be explored in subsequent content.

BIOLOGY AND EVOLUTION

CCBE — Part 2: Bacteria and lateral gene transfer

Starting at the bottom: cooperation and competition among microorganisms

Source: Khan Academy, available through creative commons

Bacteria may seem like a strange place to start a story about cooperation and competition. What can those gross things that cause infections and have weirdo names like Streptococcus (strep throat) and Staphylococcus (staph infections) tell us about ourselves?

For starters, not all bacteria are pathogenic creeps. Research has shown that we’re colonised by so many microorganisms, including neutral and even helpful bacteria, that our own cells are outnumbered by microorganisms somewhere around 10 to 1. This involves a complex combination of cooperation and competition between ourselves and our colonisers (more on this later in the series).

But beyond our own relationship with bacteria, it turns out that cooperation and competition are also part of a bacterium’s life. True, not in quite the same way as us, but in a way that helps to show how cooperation and competition are infused at every level and in every process of life.

Competition among bacteria

Okay, so how do bacteria compete? At the risk of stating the obvious, bacteria compete for resources in their environment, and this involves the usual cast of characters: sugars, fats, protein, vitamins and minerals.

Bacteria have their own DNA, and different bacteria will have different DNA, much like different people have different DNA. Bacteria don’t spread their genes by mating with other bacteria to produce offspring, but instead spread their genes by replicating, as you can see in the diagram above and the image below.

Illustrating how bacteria multiply through replication. Image made using the AI-based image generator, Gencraft

The process of replicating themselves requires energy, and any bacterium that tries to replicate in an environment with too few resources will wind up in big trouble real fast. Bacteria that replicate faster have an advantage and can outcompete their neighbours for resources, putting more of their fast-replicating genes into the future generations.

So, if fast replication gives the bacterium a competitive advantage, how do some bacteria replicate faster than others? Funnily enough, the answer lies in a type of genetic cooperation that occurs between bacteria as a population. The term for this form of bacterial cooperation is lateral gene transfer.

The biology of energy

To explain what this is and why it matters, we need to cover a few basics about our body’s universal energy currency: ATP (or adenosine triphosphate for the aficionados out there). The ATP molecule is used as the primary source of energy by all living organisms studied to date. Without ATP, an organism couldn’t function and would quickly die.

The ATP molecule. Source: Wikimedia Commons. Colour scheme: black = carbon, white = hydrogen, red = oxygen, blue = nitrogen, orange = phosphorous

ATP is also used when bacteria replicate themselves, and that’s where lateral gene transfer comes in. The key idea is that bacteria have an incentive to get rid of unnecessary genes because minimising the amount of stuff that needs to be replicated reduces the energy and time required to replicate.

As a consequence, and in stark contrast to people, bacteria purge disposable genes in an attempt to optimise their energetic efficiency and replication rate. These stretches of DNA are released into the environment where other bacteria can accept them into their own genome as a new gene. This trading of genes between bacteria as a population is known as lateral gene transfer (or my less preferred term, horizontal gene transfer).

Next time

So, what does this tell us about cooperation and competition? This was already a bit of an info dump, so we’ll leave it there for now and save the answer for next time. To be continued!

Science
Competition
Evolution
Energy
Biology
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